2013 Intro Computational Science (for Evolutionary Biologists)¶
See http://ged.msu.edu/courses/2013-fall-cse-801/ for class information.
- Helpful resources
- Homework 9 (due Tuesday, December 10, at 11:59pm PST)
- Wed, Dec 4, 2013 – The future of digital evolutionary modeling
- Wed, Nov 27, 2013 – pandas, SciPy, and matplotlib for data analysis, statistics, and plotting
- Homework 8 (due Tuesday, November 26, at 11:59pm PST)
- Wed, Nov 20, 2013 – Running evolutionary models in replicate, calculating and plotting 95% confidence intervals
- Homework 7 (due Tuesday, November 19, at 11:59pm PST)
- Wed, Nov 13, 2013 – More plotting, data wrangling, and coding an evolutionary digital model
- Homework 6 (due Tuesday, November 12, at 11:59pm PST)
- Wed, Nov 6, 2013 – Introduction to evolutionary digital modeling
- Homework 5 (due Tuesday, November 12, at 11:59pm PST)
- Wed, Oct 30, 2013 – plotting, fitting, RNAseq, and mapping
- Homework 4 (due Tuesday, Oct 29th, at 11:59pm PST)
- Wed, Oct 23, 2013 - More Python; Annotation; Scripting
- Homework 3 (due Tuesday, Oct 22nd, at 11:59pm PST)
- Wed, Oct 16, 2013 - More sequencing; mapping mismatches; lists, dicts, fns
- Homework 2 (due Tuesday, Oct 15th, at 11:59pm PST)
- Wed, Oct 9, 2013 - Illumina; shotgun sequencing; read QC
- Homework 1 (due Tuesday, Oct 8th, by midnight PST)
- Wed, Oct 2, 2013 - ipythonblocks; read QC