Helpful resources

Learning Python

Shell tutorials and references

  • Biostar

    A high quality question & answer Web site.

  • SEQanswers

    A discussion and information site for next-generation sequencing.

  • Software Carpentry lessons

    A large number of open and reusable tutorials on the shell, programming, version control, etc.

Additional Web sites

The NGS course tutorials:

UW Seattle “zero entry” workshop:

Computing and Data

Also see this great pair of blog posts on organizing projects and research workflow.